PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV33203.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 248aa    MW: 26047 Da    PI: 7.5711
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV33203.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.0001499121123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+ksF++   L  H  +H
  KZV33203.1  99 YKCSVCSKSFPSYQALGGHKASH 121
                 9***********99999998887 PP
2zf-C2H213.50.00022159181123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C++C+k+F++   L  H r+H
  KZV33203.1 159 HACSICHKTFPTGQALGGHKRRH 181
                 67*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.6E-998121No hitNo description
SMARTSM003550.005699121IPR015880Zinc finger, C2H2-like
PfamPF139124.5E-1499122IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.07499126IPR007087Zinc finger, C2H2
PROSITE patternPS000280101121IPR007087Zinc finger, C2H2
SuperFamilySSF576676.6E-9154181No hitNo description
PROSITE profilePS501579.743159186IPR007087Zinc finger, C2H2
SMARTSM003550.058159181IPR015880Zinc finger, C2H2-like
PfamPF139123.6E-12159183IPR007087Zinc finger, C2H2
PROSITE patternPS000280161181IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MALEALTSSA AAMPPLLKRR FHDFDEETPF TEGKRNKRER VDDDLFQSDE EYLAACLVML  60
ARSGATAAPP VKGDTAAATA LESKKTEPAQ PAPAQSQFYK CSVCSKSFPS YQALGGHKAS  120
HRIKPPAAAA TSSDDSNLST SASTHASNIS PLNPSGRLHA CSICHKTFPT GQALGGHKRR  180
HYEGKIGSAA SKSTAASKSV VSTSSDVTTS NGDGDSTAAR RDFDLNLPPS PVLELNLMIG  240
PGEVESSV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV33203.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240274.11e-65PREDICTED: zinc finger protein ZAT10-like
TrEMBLA0A2Z7BFJ90.0A0A2Z7BFJ9_9LAMI; Uncharacterized protein
STRINGXP_009625229.12e-62(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7352495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-35salt tolerance zinc finger