PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV33711.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

G2-like

Protein Properties

Length: 95aa MW: 10478.2 Da PI: 10.6083

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV33711.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63.4	4.1e-20	37	77	15	55
G2-like 15 veaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 veav+qLG ++AtPk l++m+ +gLt++hvkSHLQkYRl KZV33711.1 37 VEAVAQLGILDRATPKGALHIMGFQGLTIYHVKSHLQKYRL 77 9***************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.6E-19	36	78	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.5E-15	37	78	IPR006447	Myb domain, plants
SuperFamily	SSF46689	5.55E-8	37	78	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 95 aa Download sequence Send to blast
MAGWGKTIGF GSAKKVQSRS SKAGLHHLYF WRFGCSVEAV AQLGILDRAT PKGALHIMGF 60 QGLTIYHVKS HLQKYRLAKY LPDSSSDGTN LDKKI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	4e-15	37	80	16	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV33711.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009776486.1	5e-26	PREDICTED: myb family transcription factor APL-like
Refseq	XP_009776487.1	5e-26	PREDICTED: myb family transcription factor APL-like
Refseq	XP_009776488.1	5e-26	PREDICTED: myb family transcription factor APL-like
Refseq	XP_009776490.1	5e-26	PREDICTED: myb family transcription factor APL-like
Refseq	XP_012841911.1	5e-26	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_012841912.1	5e-26	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_012841913.1	5e-26	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_012841914.1	5e-26	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_012841915.1	5e-26	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_012841917.1	5e-26	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_012841918.1	5e-26	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_016456548.1	4e-26	PREDICTED: myb family transcription factor APL-like
Refseq	XP_016456549.1	4e-26	PREDICTED: myb family transcription factor APL-like
Swissprot	Q9SJW0	9e-25	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2Z7BP36	1e-63	A0A2Z7BP36_9LAMI; Myb family transcription factor family protein
STRING	XP_009776486.1	2e-25	(Nicotiana sylvestris)
STRING	Migut.H01641.1.p	2e-25	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-27	G2-like family protein