PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV33950.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 136aa    MW: 15676 Da    PI: 10.5257
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV33950.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox37.44.3e-123302956
                HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox 29 ereeLAkklgLterqVkvWFqNrRakek 56
                +++ LA++l+L+ rqV vWFqNrRa+ k
  KZV33950.1  3 QKQLLAERLNLKPRQVEVWFQNRRARTK 30
                6789**********************98 PP
2HD-ZIP_I/II76.16.2e-253672892
  HD-ZIP_I/II 28 rKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
                 +K+ la++L+l+prqv+vWFqnrRARtk+kq+E + e+Lk+ +++l++en++L+++  eLr+++k
   KZV33950.1  3 QKQLLAERLNLKPRQVEVWFQNRRARTKLKQTEINREFLKKDCERLSDENRQLKRQLLELRSSVK 67
                 899**********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007112.665132IPR001356Homeobox domain
SuperFamilySSF466898.55E-10340IPR009057Homeodomain-like
PfamPF000461.8E-9330IPR001356Homeobox domain
CDDcd000863.28E-7333No hitNo description
Gene3DG3DSA:1.10.10.603.1E-10330IPR009057Homeodomain-like
PROSITE patternPS000270730IPR017970Homeobox, conserved site
SMARTSM003403.0E-73275IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MVQKQLLAER LNLKPRQVEV WFQNRRARTK LKQTEINREF LKKDCERLSD ENRQLKRQLL  60
ELRSSVKTEN PPPPAPQLRQ FFNPMSKAAA AGLKTCPSCE QVWSDRGGAK EETTAAAAVM  120
EVGHEYKLIR RGSLET
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12432RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV33950.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022886874.12e-44homeobox-leucine zipper protein HAT22-like
SwissprotA2XE761e-28HOX19_ORYSI; Homeobox-leucine zipper protein HOX19
SwissprotQ8GRL41e-28HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19
TrEMBLA0A2Z7BI525e-95A0A2Z7BI52_9LAMI; Uncharacterized protein
STRINGGSMUA_Achr10P23440_0013e-29(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.18e-28HD-ZIP family protein