PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV34829.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Nin-like

Protein Properties

Length: 982aa MW: 108915 Da PI: 6.6173

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV34829.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	571	622	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ KZV34829.1 571 AEKNVSLHVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 622 589***********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.87	561	642	IPR003035	RWP-RK domain
Pfam	PF02042	5.5E-26	574	622	IPR003035	RWP-RK domain
PROSITE profile	PS51745	18.916	881	963	IPR000270	PB1 domain
SMART	SM00666	6.4E-18	881	963	IPR000270	PB1 domain
SuperFamily	SSF54277	5.56E-20	882	965	No hit	No description
Gene3D	G3DSA:3.10.20.240	4.7E-21	883	962	No hit	No description
Pfam	PF00564	1.5E-14	883	962	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 982 aa Download sequence Send to blast
MENGVRSSKS DETFGNVPEL INIDAYTGWY DGPSGFSEQM LPHFAFSTGM ASTNFPSFDG 60 LNLTDQYTSE ISMVGGGTLG NSFITDGKFH ENSHLAIPIN PADGGFNFSE MLEKSSRLHN 120 VVGDERNSVI PRLPFQSLAE KMLRALYLFK EWSEVGILAQ VWVPVMDGSR HILSTCEQPY 180 LLDQTLSGYR EVSRSFTFSP ESNPGSVPGL IGRVFTSKIP EWTSNVRYYN KAEYARKQYA 240 IDHKVQGSIA LPVFEDDSLQ TACCAVLELV TTKEKSNFDL EMQNVCRALQ AVNLRSTVPH 300 RRYPQTLSKN QRLALAEITD VLRAVCHAHR LPVALAWIPC IYIEGSGSET KLASATGHMS 360 LYKKWVLRIH DAACYVNDKD IQGFMHACTQ HHLENGQGVA GKALQSNHAF FYSDVKEYHV 420 HEYPLVHHAR KFGLQAAVAV RLRSTFTGDD DYVLEFFLPV NLKGSTEQQL LLNNLSSTMQ 480 RICRTLRTVA DAEFLGLEDT KDKLHGKEGK RIPPLSRRSS EHSLVNGDMN SPEQIMQNIP 540 DSIAMRTDSD GHHGQVISGS KKLMEKKRST AEKNVSLHVL QQYFSGSLKD AAKSIGVCPT 600 TLKRICRQHG ISRWPSRKIN KVNRSLRKIQ SVIDSVEGVE GGLKFDPTTG ELVATASILQ 660 EFDPRKSVVL PYNNPSAKAS DLVIQNTKTV PRSTYIDIET TTEKMEEKCC LNENDLSGFN 720 LIGTNFYKGD CKTNIPSEKH EESELATLDV RLSSPASLNT MPLIIYPKSP PDNFLAREEC 780 SSRVLENDYT KPVPSGSHFF SGISSSMAAD GKTHSESKGN IETAADDGAV EHKQLTSSGM 840 TDSTNGSVSG SLMNGSSSSM KSYDDRRDLK TEAAFGDNRC KLVVKATYKE DTVRFKFNPS 900 AGCFQLYEEV AIRFKMQTGQ FQLKYLDDEG EWVLMVSDSD FHECLDILDT LGTCIVKFQV 960 RDVPTTFGSS GSSNCFLGGG SL

Sequence ? help Back to Top

Protein Sequence Length: 982 aa Download sequence Send to blast

MENGVRSSKS DETFGNVPEL INIDAYTGWY DGPSGFSEQM LPHFAFSTGM ASTNFPSFDG  60
LNLTDQYTSE ISMVGGGTLG NSFITDGKFH ENSHLAIPIN PADGGFNFSE MLEKSSRLHN  120
VVGDERNSVI PRLPFQSLAE KMLRALYLFK EWSEVGILAQ VWVPVMDGSR HILSTCEQPY  180
LLDQTLSGYR EVSRSFTFSP ESNPGSVPGL IGRVFTSKIP EWTSNVRYYN KAEYARKQYA  240
IDHKVQGSIA LPVFEDDSLQ TACCAVLELV TTKEKSNFDL EMQNVCRALQ AVNLRSTVPH  300
RRYPQTLSKN QRLALAEITD VLRAVCHAHR LPVALAWIPC IYIEGSGSET KLASATGHMS  360
LYKKWVLRIH DAACYVNDKD IQGFMHACTQ HHLENGQGVA GKALQSNHAF FYSDVKEYHV  420
HEYPLVHHAR KFGLQAAVAV RLRSTFTGDD DYVLEFFLPV NLKGSTEQQL LLNNLSSTMQ  480
RICRTLRTVA DAEFLGLEDT KDKLHGKEGK RIPPLSRRSS EHSLVNGDMN SPEQIMQNIP  540
DSIAMRTDSD GHHGQVISGS KKLMEKKRST AEKNVSLHVL QQYFSGSLKD AAKSIGVCPT  600
TLKRICRQHG ISRWPSRKIN KVNRSLRKIQ SVIDSVEGVE GGLKFDPTTG ELVATASILQ  660
EFDPRKSVVL PYNNPSAKAS DLVIQNTKTV PRSTYIDIET TTEKMEEKCC LNENDLSGFN  720
LIGTNFYKGD CKTNIPSEKH EESELATLDV RLSSPASLNT MPLIIYPKSP PDNFLAREEC  780
SSRVLENDYT KPVPSGSHFF SGISSSMAAD GKTHSESKGN IETAADDGAV EHKQLTSSGM  840
TDSTNGSVSG SLMNGSSSSM KSYDDRRDLK TEAAFGDNRC KLVVKATYKE DTVRFKFNPS  900
AGCFQLYEEV AIRFKMQTGQ FQLKYLDDEG EWVLMVSDSD FHECLDILDT LGTCIVKFQV  960
RDVPTTFGSS GSSNCFLGGG SL

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV34829.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011073897.1	0.0	protein NLP9
Swissprot	Q9M1B0	0.0	NLP9_ARATH; Protein NLP9
TrEMBL	A0A2G9GDZ0	0.0	A0A2G9GDZ0_9LAMI; Uncharacterized protein
STRING	XP_009588830.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3981	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	0.0	Nin-like family protein