PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV34913.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 311aa    MW: 34343.7 Da    PI: 8.4633
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV34913.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.45.1e-22122180259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg +WrKYGqK++ +s++pr YYrCt++  gC++kk+v++ +edp + ++tY ++H+++
  KZV34913.1 122 EDGGAWRKYGQKQILNSKYPRCYYRCTHKsqGCKAKKQVQKMKEDP-LYQTTYFNHHTCT 180
                 7999************************999************666.7899******995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.741116167IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.8E-21116180IPR003657WRKY domain
SuperFamilySSF1182904.84E-21119180IPR003657WRKY domain
SMARTSM007744.4E-29121181IPR003657WRKY domain
PfamPF031068.2E-22122179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MRNLNDNLHA MERRLMEELV QGKSSAIILQ TLLHNPFKDE GSISREELAM KILRSFNNSI  60
SIASSCASVV PSAQISGAVD CGGGGGSTSS GGRMKKTAKD RRGCYKRKRP LDSWTKVSPT  120
IEDGGAWRKY GQKQILNSKY PRCYYRCTHK SQGCKAKKQV QKMKEDPLYQ TTYFNHHTCT  180
GTQAALPQHI VELDQIESNL LSFQGSKNIH YPKPANASSL KQEFENVGTQ TVGIPYAKSS  240
ANTSSWLGNV GPGPSRCKQV FSPGIPVPGD DLEEEVSGLY SCASMDRFHG LDMEVDQLGD  300
IDFDEMYNGN M
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-17117179468OsWRKY45
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194109KKTAKDRRGCYKRKRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV34913.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7BJW10.0A0A2Z7BJW1_9LAMI; Putative WRKY transcription factor 70
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61992233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-29WRKY DNA-binding protein 70