PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV34918.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family B3
Protein Properties Length: 193aa    MW: 22052.2 Da    PI: 5.0292
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV34918.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.42.3e-12411181494
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                   l+lp k a+++++    +++  l+d++g++W +++  +  +g   + kGW++F + ++L  g +++F++++  s+f+ ++
  KZV34918.1  41 EYLCLPPKLAATMKHM--VGQEAHLQDSTGKKWPITI--SYVDGVLAFHKGWNDFFSGHRLSIGQIMMFEHINGsSCFSVRI 118
                 4599*****9888544..4558***************..77788899************************97669995554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019363.14E-1926124IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.1E-1727122IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.08228122IPR003340B3 DNA binding domain
CDDcd100178.80E-1329119No hitNo description
SMARTSM010191.0E-530122IPR003340B3 DNA binding domain
PfamPF023625.5E-1041119IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MERAQLPKTS KAYKKRPELE KALLPDVTRF FKPIYGDDYS EYLCLPPKLA ATMKHMVGQE  60
AHLQDSTGKK WPITISYVDG VLAFHKGWND FFSGHRLSIG QIMMFEHING SSCFSVRIYG  120
IDACEILNFD QEIAEDGGEE RSSQSNTIEV VSQGNVGTIE NDVGLLYCLY FFMVYYYSFG  180
DTIIIIFIYS LYI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV34918.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7BMV01e-143A0A2Z7BMV0_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22102352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.19e-12B3 family protein