PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV35380.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family LFY
Protein Properties Length: 401aa    MW: 45300.1 Da    PI: 6.5884
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV35380.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY643.23.8e-19653824384
     FLO_LFY   4 eafsas..lfkwdpraaaaapparlleeaavseapleaaaaaaarklr.....eleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 
                 +afsa+  +fkwdpra   +pp+r++e  a++++p   ++aa  +++r     +lee+f+ayG+ry+t+akia+lGftv+tL+dm+deel+++m+sl++
  KZV35380.1   5 DAFSAAasFFKWDPRALF-PPPNRMMEAVAQPPPP-PLQQAAGGYSIRprelgCLEEMFQAYGIRYYTAAKIADLGFTVNTLLDMRDEELEEMMNSLCQ 101
                 446554449*****9765.7888888777666655.55556666666566777********************************************** PP

     FLO_LFY  96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqk 194
                 ifr+dllvGeryGikaavraerrrleeee  ++rr+lls d+++aldalsqeglsee+vq+ekeaa+sgg+g   +e+va+  +k  ++++k+   k +
  KZV35380.1 102 IFRWDLLVGERYGIKAAVRAERRRLEEEE--ARRRHLLSGDTTHALDALSQEGLSEEHVQQEKEAAVSGGGGGRVWEMVASGGRK--QRRRKNY--KGR 194
                 ***************************87..99999*******************************************998533..2222222..333 PP

     FLO_LFY 195 rkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkag 293
                  +   + ++eed+d+e+e  ed+++ +  g erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcPtkvtnqvfryakkag
  KZV35380.1 195 LRM-AS-MEEEDDDDETEGPEDDDNVAGVGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAG 291
                 322.22.233555555566666777777789******************************************************************** PP

     FLO_LFY 294 asyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlersk 384
                 asyinkPkmrhYvhCYalhcLdee+sn++rrafkergenvGawrqacykplvaiaarqgwdida+fnahp+LsiWYvPtkLrqLCh+ers+
  KZV35380.1 292 ASYINKPKMRHYVHCYALHCLDEETSNSMRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPHLSIWYVPTKLRQLCHAERSS 382
                 *****************************************************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF016982.7E-2021383IPR002910Floricaula/leafy protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010582Biological Processfloral meristem determinacy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0031490Molecular Functionchromatin DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MDPADAFSAA ASFFKWDPRA LFPPPNRMME AVAQPPPPPL QQAAGGYSIR PRELGCLEEM  60
FQAYGIRYYT AAKIADLGFT VNTLLDMRDE ELEEMMNSLC QIFRWDLLVG ERYGIKAAVR  120
AERRRLEEEE ARRRHLLSGD TTHALDALSQ EGLSEEHVQQ EKEAAVSGGG GGRVWEMVAS  180
GGRKQRRRKN YKGRLRMASM EEEDDDDETE GPEDDDNVAG VGGERQREHP FIVTEPGEVA  240
RGKKNGLDYL FHLYEQCREF LIQVQNIAKE RGEKCPTKVT NQVFRYAKKA GASYINKPKM  300
RHYVHCYALH CLDEETSNSM RRAFKERGEN VGAWRQACYK PLVAIAARQG WDIDAIFNAH  360
PHLSIWYVPT KLRQLCHAER SSVAVSTSLN GGGAGGDQLL F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2vy1_A1e-1102214011194PROTEIN LEAFY
2vy2_A1e-1102214011194PROTEIN LEAFY
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtRequired for flower development. FLO may interact in a sequential manner with other homeotic genes affecting floral organ identity.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00095SELEXTransfer from AT5G61850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV35380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073600.20.0LOW QUALITY PROTEIN: floricaula protein
SwissprotP239150.0FLO_ANTMA; Floricaula protein
TrEMBLA0A2Z7BT250.0A0A2Z7BT25_9LAMI; Floricaula/leafy
STRINGMigut.I00669.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66682333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-139floral meristem identity control protein LEAFY (LFY)
Publications ? help Back to Top
  1. Coen ES, et al.
    floricaula: a homeotic gene required for flower development in antirrhinum majus.
    Cell, 1990. 63(6): p. 1311-22
    [PMID:1702033]