PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV35490.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ZF-HD
Protein Properties Length: 175aa    MW: 19590.5 Da    PI: 7.5331
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV35490.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.81.1e-27961357
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                 + +Y+eC++NhAaslG++a+DGCgEf+p+   ++    l CaACgCHRnFHR+ +
   KZV35490.1  9 NEVYRECQRNHAASLGSYATDGCGEFTPD--YTTPGGHLSCAACGCHRNFHRKVT 61
                 678*************************8..5556788**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047702.6E-231161IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015668.7E-231259IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152322.7621260IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257749.0E-151259IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466891.2E-1690159IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-2793161IPR009057Homeodomain-like
TIGRFAMsTIGR015653.8E-28100159IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MEGGDNSSNE VYRECQRNHA ASLGSYATDG CGEFTPDYTT PGGHLSCAAC GCHRNFHRKV  60
TYGLASHRSQ VAEIIDYSGG GAERQITTTT PYSPESSNNK KRFRTKFTED QKEKMLGFAE  120
NLGWKLQRKD QEEDEIERFC RGIGISRKVF KVWMHNHKNS STHSAGNASS LTDEQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A6e-201011641879ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
UniProtPutative transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV35490.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073164.14e-87zinc-finger homeodomain protein 7-like
SwissprotA2XLF41e-40ZHD11_ORYSI; Zinc-finger homeodomain protein 11
SwissprotQ10DV51e-40ZHD11_ORYSJ; Zinc-finger homeodomain protein 11
TrEMBLA0A2Z7BTD81e-130A0A2Z7BTD8_9LAMI; Uncharacterized protein
STRINGMigut.I00573.1.p4e-78(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118652023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.11e-40homeobox protein 21