PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV36369.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NF-YA
Protein Properties Length: 155aa    MW: 17314.3 Da    PI: 8.795
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV36369.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA47.27.2e-15117152136
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 
                 +ep+YVNaKQy++Il+RR  Rak++ e+++ +  rk
  KZV36369.1 117 EEPVYVNAKQYHGILRRRRLRAKAALENRVATSVRK 152
                 69****************************777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005210.0089115155IPR001289Nuclear transcription factor Y subunit A
PROSITE profilePS5115218.556116155IPR001289Nuclear transcription factor Y subunit A
PfamPF020459.6E-11118151IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MNLVQTGKRD EQYHGLDAYG LKDLSSSGSQ SWWSYGSNHG TVNIFDPDGS TRERILLSVC  60
REENQENYGA MVPARAIGEN LMQETARHPR SAGGLFPANP DPYGSGHLLS SYSFSHEEPV  120
YVNAKQYHGI LRRRRLRAKA ALENRVATSV RKVCC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV36369.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075221.13e-14nuclear transcription factor Y subunit A-1-like
TrEMBLA0A2Z7BPI31e-113A0A2Z7BPI3_9LAMI; Nuclear transcription factor Y subunit A-7-like