PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV36391.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 353aa    MW: 40055.5 Da    PI: 6.0086
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV36391.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.9e-31190244155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+r+rW+++LH+rFv++v+qLGG+e+AtPk+il+lm+ +gLt+ hvkSHLQkYR+
  KZV36391.1 190 KKRIRWSSDLHDRFVKCVNQLGGPERATPKAILNLMDTEGLTIFHVKSHLQKYRS 244
                 78****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.988187247IPR017930Myb domain
SuperFamilySSF466891.79E-15188244IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.7E-28188245IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-24190245IPR006447Myb domain, plants
PfamPF002492.4E-7194243IPR001005SANT/Myb domain
PfamPF143792.7E-15274321IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MQQNYGFSTD LSTGPWHQSA PMELDTGFIA AGNGSQQMSF RPESSSNTII DRIGSQASGF  60
YATEFLMGLP QFVFQENNSI PCSRQFNTFY RKTPDFRSDN GILSVPRTQT SKGVYTRPLD  120
DLSEKEQILY LKNRLLGDLD DSCTVTPCAP FDSYPDICEP QSLYASHSTH VNEFGLSISS  180
ASSGGVSSCK KRIRWSSDLH DRFVKCVNQL GGPERATPKA ILNLMDTEGL TIFHVKSHLQ  240
KYRSAKYVQE SDEDKSEKKT STHNEPLVDI KTGMQLKEAL QQQLDFQRHL YEQLETQRNL  300
QIRIEEQTKQ LKRLFEQQQK TTKSLVDHSY HDSKSPENIS TTFEDVTFPS EAD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-22190247158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-22190247158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-22190247158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-22190247158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-22190247259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV36391.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075159.11e-115myb family transcription factor PHL5 isoform X1
TrEMBLA0A2Z7BP820.0A0A2Z7BP82_9LAMI; Uncharacterized protein
STRINGMigut.J01825.1.p3e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-57G2-like family protein