PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV36470.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GRAS
Protein Properties Length: 613aa    MW: 67418.6 Da    PI: 8.1077
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV36470.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS313.64.5e-962456123373
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 + Lle+A a+s+++   a++l +rl++l++++g++ qRlaay++ A+++r +         lpp + se   +e+  a++l+++v P+++ ++++aNqa
  KZV36470.1 245 RCLLEAAVAISERKPDIASELFSRLQHLSNERGTSEQRLAAYMVSAMKSRASP------LELPPPPVSELYGKEHYVATQLLYDVLPCFRHGFMAANQA 337
                 679*************************************************9......568888888888**************************** PP

        GRAS 102 Ileavege..ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 Il ++++   +++H++Dfdi++GlQ++ L++aLa+     +++ +l+iT++ +++   +e+l+ +g+rL+++A+e gv f++++   + ++dl+ e+L+
  KZV36470.1 338 ILTSASERgfSKIHVVDFDIGHGLQYVHLIHALAANIshgKPSSMLKITTFTDSS--AAEKLKDVGDRLKNLANEKGVCFSIRI-KNSGTKDLSRESLE 433
                 ****9988789***********************87765455569********55..9*************************9.999*********** PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 v+++EalaVn+++ l r++desvs++++rd++L+ vk +sP v+++veqe+++n++++++r+ ea+++y al++sl+a+++re+     +E+  l  + 
  KZV36470.1 434 VQSDEALAVNFAFTLCRIPDESVSTDNQRDDLLRRVKMMSPAVMTIVEQEMNTNTAPLVARVREACDHYGALLESLDATVSREDPRWLRIEQG-LCLRM 531
                 *********************************************************************************************.78889 PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +n vaceg++r+er+e ++kWr+rl+++GFk  p s+ ++++ ++ l+     + g++v+eesg + +gW++r+++++SaW
  KZV36470.1 532 KNSVACEGRDRVERCEVFGKWRARLGMSGFKIRPASQPVVDSLRSKLHYETggNPGFTVNEESGGVSFGWMGRTITVASAW 612
                 *******************************************999886554799************************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098543.668217591IPR005202Transcription factor GRAS
PfamPF035141.5E-93245612IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    Send to blast
MSSGFLPDLF TAGRRSAVVP TNMKLQQQGS LSSPVAGNPA DPTARILARR GADTIPMGKR  60
SLTEFQQQQN FLQQQQGLEF YLRNVKPRHG NYQHAPTISN PSTVALPQVS NSLMNNVNSR  120
YGLTIIKQQR PQSLILSNTG DVSTGVFLPN LISNKASVDS IQGPDFSARE SEKMILDLKL  180
QELEKRLLGD EDDAEEVSTV TTTELSETML NLINPARKPL SPSPTSSSSS CSSTAASPLL  240
TCPKRCLLEA AVAISERKPD IASELFSRLQ HLSNERGTSE QRLAAYMVSA MKSRASPLEL  300
PPPPVSELYG KEHYVATQLL YDVLPCFRHG FMAANQAILT SASERGFSKI HVVDFDIGHG  360
LQYVHLIHAL AANISHGKPS SMLKITTFTD SSAAEKLKDV GDRLKNLANE KGVCFSIRIK  420
NSGTKDLSRE SLEVQSDEAL AVNFAFTLCR IPDESVSTDN QRDDLLRRVK MMSPAVMTIV  480
EQEMNTNTAP LVARVREACD HYGALLESLD ATVSREDPRW LRIEQGLCLR MKNSVACEGR  540
DRVERCEVFG KWRARLGMSG FKIRPASQPV VDSLRSKLHY ETGGNPGFTV NEESGGVSFG  600
WMGRTITVAS AWY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A3e-3225961219374GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV36470.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076123.10.0scarecrow-like protein 8
TrEMBLA0A2Z7BW970.0A0A2Z7BW97_9LAMI; Scarecrow-like protein 8-like
STRINGMigut.F01094.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40232443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-112SCARECROW-like 8