PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV38332.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 246aa    MW: 28185.6 Da    PI: 8.0978
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV38332.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH382.9e-1281130455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                 +hn+ Er RR+++N  +++Lr+llP     +++K +s  ++  ++ +YI +Lq
  KZV38332.1  81 NHNACERDRRKKLNALYSTLRSLLPAE---DQPKqMSIPSTISRVLKYIPELQ 130
                 8*************************8...78888***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.55E-1676147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.33277129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-978134No hitNo description
Gene3DG3DSA:4.10.280.104.2E-1379147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.2E-1081130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-883135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MLALSPQVSN FGWFWEDPNT FDNQENVCIQ RTDQVSNSIY AADRLHSPPS NALQPKNDHF  60
SSSRLELTEK RDTDSTAKKF NHNACERDRR KKLNALYSTL RSLLPAEDQP KQMSIPSTIS  120
RVLKYIPELQ KQIQRLSEKK EHLLSKISRQ QDSFIDFSTN DRRTAVHMTR PSPSSAVLDD  180
GEVIFQFSTP KGEKGSFSTT LLNLEEEGFL VLNASCFESS QGRVFNNIHL QGIKRERVWE  240
SPIINI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV38332.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022842172.14e-64transcription factor ORG2-like isoform X1
TrEMBLA0A2Z7BUK40.0A0A2Z7BUK4_9LAMI; Uncharacterized protein
STRINGEMJ061167e-52(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.14e-42bHLH family protein