PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV39381.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bZIP
Protein Properties Length: 188aa    MW: 21412 Da    PI: 7.7655
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV39381.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.95.2e-094541363
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                NR +A rs +RK  +i+eLe+kv++L++  ++L  +l  l+     l+ e+
  KZV39381.1  4 NRQSAARSKERKMRYIAELERKVQTLQTDATSLSAQLTLLQRDTHGLTVEN 54
                *************************************99998877777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147035.40E-20146No hitNo description
SuperFamilySSF579591.34E-9248No hitNo description
PfamPF001706.0E-7447IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.048457IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.7E-10450No hitNo description
SMARTSM003388.7E-7456IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
IWANRQSAAR SKERKMRYIA ELERKVQTLQ TDATSLSAQL TLLQRDTHGL TVENSELKLR  60
LQTMEQQVQL QDALNDALKE EIQHLKVLTC QTIPNGGPMI NFPVSTYGTE KSYYGNNQAV  120
HALLTAQQLQ QLQLHSQKQQ NQFQQHPMHQ FQQQPPPQQP SMQLQQQAGD VKVSSIQKDV  180
DPDASSKD
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV39381.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010672248.15e-77PREDICTED: probable transcription factor PosF21
SwissprotQ040885e-57POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2Z7BXS81e-134A0A2Z7BXS8_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_010672248.12e-76(Beta vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-60bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]