PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV39736.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 339aa    MW: 37195.1 Da    PI: 9.5175
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV39736.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.78.8e-32267324359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh+
  KZV39736.1 267 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGQHNHS 324
                 99************************988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.3E-15217263IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.2E-33254324IPR003657WRKY domain
PROSITE profilePS5081130.848260326IPR003657WRKY domain
SuperFamilySSF1182904.58E-27262324IPR003657WRKY domain
SMARTSM007744.8E-38265325IPR003657WRKY domain
PfamPF031063.9E-27267323IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MAVELMVNYR SNSFITQSEE YAEKEAASGL QSVEKLMKLF SSEQDRNPDE DYAAVADVAV  60
SKFKRVVSLL GRTRTGHARF RRAPLSSSSS SSSAAYNPDS TSNSVLIPLM AMENHRAEAQ  120
SYDKVYCPTP IQQVPSPDYH HVVKKDGVES GSKTINFSYS PMVSRGNMFL SSLTGGDLTE  180
TKQQLTSPPS ALHMISSLSQ VSNSSGKPPL SSCSSFKRKC TSSENAVSGK CSGSSGCCHC  240
SKRKKLRLKR VIRIPAISMK MSDIPPDDYS WRKYGQKPIK GSPHPRGYYK CSSVRGCPAR  300
KHVERALDDP TMLIVTYEGQ HNHSLSIAET NSTIILESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21253325273WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV39736.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608534.11e-131PREDICTED: probable WRKY transcription factor 7
RefseqXP_016498573.11e-131PREDICTED: probable WRKY transcription factor 7
TrEMBLA0A2Z7BZP70.0A0A2Z7BZP7_9LAMI; WRKY DNA-binding protein 7 isoform 1
STRINGXP_009608534.11e-131(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.11e-61WRKY DNA-binding protein 15