PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV40300.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HB-other
Protein Properties Length: 129aa    MW: 15190.2 Da    PI: 9.1851
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV40300.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox41.62.2e-13454656
                S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +f+k+ql++L+++Fe++ ++s++++ eL + +gL+ +qV+ WF   Rak++
  KZV40300.1  4 RFKKYQLHALNAAFEESEHLSKQKKSELVRATGLDVEQVTGWFNRERAKRR 54
                69***********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007112.892156IPR001356Homeobox domain
SMARTSM003891.0E-6260IPR001356Homeobox domain
SuperFamilySSF466895.56E-12360IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.3E-14463IPR009057Homeodomain-like
CDDcd000863.93E-7446No hitNo description
PfamPF000465.3E-11454IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MAKRFKKYQL HALNAAFEES EHLSKQKKSE LVRATGLDVE QVTGWFNRER AKRRARESSE  60
DLKRENAQLQ ERLREGKERE AELENELRET KKRKAELEAE NWNLKQQLGI MDGCYSHCDP  120
VLMFVKGIA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV40300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087134.25e-41homeobox-leucine zipper protein ATHB-20-like
TrEMBLA0A2Z7C7723e-88A0A2Z7C772_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1565047