PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV40302.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HB-other
Protein Properties Length: 124aa    MW: 14579.6 Da    PI: 9.3225
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV40302.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.41.4e-09454656
                S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +f+k+q+++L+++Fe++ ++++e++ eL   +gL+ +q++  F   Rak++
  KZV40302.1  4 RFNKHQINALNAAFEESEHLTKEKKHELVGVTGLDVEQITSRFNRERAKKR 54
                69***********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.22156IPR001356Homeobox domain
SMARTSM003890.0021260IPR001356Homeobox domain
SuperFamilySSF466893.68E-9362IPR009057Homeodomain-like
CDDcd000861.96E-5457No hitNo description
PfamPF000463.8E-7454IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.6E-10461IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MAKRFNKHQI NALNAAFEES EHLTKEKKHE LVGVTGLDVE QITSRFNRER AKKRTKQKMG  60
DLERKNDELQ EQLRLSEERE AALRKREAEL EAENRNLKQQ LGLMDQCNSP CDPFFMFVRG  120
LAKH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV40302.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087134.26e-35homeobox-leucine zipper protein ATHB-20-like
TrEMBLA0A2Z7C0792e-84A0A2Z7C079_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1565047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.18e-06homeobox 3