PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV40329.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 329aa    MW: 37586 Da    PI: 9.6898
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV40329.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.75.4e-28198253156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r+ W+peLH+rFvea+ +LGG+  AtP+ i+e m v+gLtl++vkSHLQkYR++
  KZV40329.1 198 KQRRSWSPELHHRFVEALLKLGGARAATPRLIRENMAVEGLTLDQVKSHLQKYRMH 253
                 79****************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.31E-16195256IPR009057Homeodomain-like
PROSITE profilePS5129413.471195255IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.2E-25196256IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-23198253IPR006447Myb domain, plants
PfamPF002492.6E-7200251IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MGMGSRICPE LSLDCPSSSR YLVQKPIWKF LKEVSGIRSV PEKISKLHEY VDRLQDEMKK  60
IYSFKRELPF CMLLLNDAIV MMEDELIKFR GSSTQPLLKE FIPLKKDEEV ESVKENTLTN  120
FNDEKSWKNS LQLGNLNNVH HFQNSGFDCI KHMLKPDKSR KRAKEKMNNP LEIKVKEEDN  180
ESSLGSNLKA LERQTTKKQR RSWSPELHHR FVEALLKLGG ARAATPRLIR ENMAVEGLTL  240
DQVKSHLQKY RMHTKKSTPT SVQPIGVGDS RLPQEPHGIL GSSQSRSPHG LTGSSHGTST  300
TTGGDTIIEE DDERSEIHSW RSRLQRCVV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV40329.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022860939.11e-73transcription factor HHO5-like isoform X2
TrEMBLA0A2Z7C0P60.0A0A2Z7C0P6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43612443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.11e-35G2-like family protein