PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41027.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GRAS
Protein Properties Length: 637aa    MW: 69184.5 Da    PI: 7.7621
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41027.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS340.92.2e-1042626362373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ L++ A a+s+g+ e a  +L+rl++ as++g++ qRlaa+++  L++r++     ++   +p + +e  s+e+  a ++++e s ++k+++++aN 
  KZV41027.1 262 RQSLIDLALAISEGKPEIAADILTRLQHVASSKGNSEQRLAAHVLSSLKSRVNP----VV---NPPPVAELYSKEQSVAAQMLYEFSSCFKLGFMAANL 353
                 689**************************************************9....44...55555555599999999******************* PP

        GRAS 101 aIleavege..ervHiiDfdisqGlQWpaLlqaLasRp.egpp..slRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                 aIlea++++  +++H++D+di+qG+Q++ Ll+aLa+++ eg+p  +l+iT++ ++++      s+e+++++ge L+++A++l+v++ + v    ++++l
  KZV41027.1 354 AILEATSEHgfTKIHVVDLDIGQGGQYMHLLHALAAKKsEGKPtsMLKITTLTDSAAAargcsSEEKVRTVGEELKSLASKLDVSLAICV-KNVNITEL 451
                 ******998889***********************77765555459********8877999*9**************************9.899***** PP

        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                 + e+L++kp+EalaVn+++ql++l+desv++e++rde+L+ vk+lsP+v+++veqe++ n++++++r+ e +e+y al+dsl+a++p+++++r+ +E+ 
  KZV41027.1 452 SRENLDIKPDEALAVNFAFQLYKLPDESVTTENPRDEMLRRVKGLSPTVMTIVEQEMNANTAPLVARVREVCEHYGALLDSLDATVPKDNSNRVRIEEG 550
                 *************************************************************************************************** PP

        GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaW 373
                  l+r+i+n vaceg++r+er+e ++kWr+r+++aGFk  p+s+ aa++ ++ l+     + g++v+e+sg +++gW++r+L+++SaW
  KZV41027.1 551 -LSRKIKNSVACEGRDRVERCEVFGKWRARVGMAGFKIRPMSQLAADSLRSKLHSGTrvNPGFTVNEQSGGICFGWMGRTLTVASAW 636
                 .************************************************999987655789************************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098545.67235615IPR005202Transcription factor GRAS
PfamPF035147.7E-102262636IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MSSGFSGGVP DFFTAGRRTT NMPLSMDSNN LNSQQQVSFR SPLSGIQADP NAQIAVHRRA  60
DLLGKRSLAE FQHQQNILQQ QGLGFYLRNV KPRPNYQHAS PVSTLSPVDF PPVTTLSPDV  120
SSMSSSLVNN TNPRYGFPIL HQQRLQPLIL SNTTNVNNVT SGIPLPKLVL NQASVILGPG  180
HDLSAQECEK NILNHKLQEL EKQLLGDEDE GEAASVITSN GWSETIQNLI NPEQKPISPS  240
PTSSSSSSCS STSASPPLPC SRQSLIDLAL AISEGKPEIA ADILTRLQHV ASSKGNSEQR  300
LAAHVLSSLK SRVNPVVNPP PVAELYSKEQ SVAAQMLYEF SSCFKLGFMA ANLAILEATS  360
EHGFTKIHVV DLDIGQGGQY MHLLHALAAK KSEGKPTSML KITTLTDSAA AARGCSSEEK  420
VRTVGEELKS LASKLDVSLA ICVKNVNITE LSRENLDIKP DEALAVNFAF QLYKLPDESV  480
TTENPRDEML RRVKGLSPTV MTIVEQEMNA NTAPLVARVR EVCEHYGALL DSLDATVPKD  540
NSNRVRIEEG LSRKIKNSVA CEGRDRVERC EVFGKWRARV GMAGFKIRPM SQLAADSLRS  600
KLHSGTRVNP GFTVNEQSGG ICFGWMGRTL TVASAWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A7e-402586369374GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41027.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076123.10.0scarecrow-like protein 8
TrEMBLA0A2Z7C2S60.0A0A2Z7C2S6_9LAMI; Uncharacterized protein
STRINGMigut.F01094.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40232443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-139SCARECROW-like 8