PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV42654.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 431aa    MW: 48243.7 Da    PI: 6.2584
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV42654.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.3e-08336376954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r+RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  KZV42654.1 336 ARQRRERISEKIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 376
                 69******************95.....5****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.824327376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.53E-10333381No hitNo description
SuperFamilySSF474591.57E-13333386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-12333382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-11335385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-5336376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MDNLDWRNQQ HELEENLMKF DSNTILYGSG RIGISGNVYN PMEQFHKSSD QSHSIISQWN  60
MSQNQEFSMN PQNGLVLDGH EKTMPGMSSN MGSLGSLECL LSTSNSQTDN ASVEDDGISV  120
IFSDCKNLWD LTRNLDAAAA AAVNSVPIVS PNKPRGGIEM GHRTKFSSPK YEPNATKLPS  180
WNFSGETVKS VPSVALLSSD EEELSRILEN DRATINQSRS SIAQYEETNT SKRRRLEDEH  240
QNLGSYTSEG TNFNLITPDH DNYTNSKRPV SSSNINFQKA TSSVSSEEPD SEAIAQMKEM  300
IYRAAAFRPV NFGVETVDKP KRKNMKISND PQTVAARQRR ERISEKIRVL QRLVPGGSKM  360
DTASMLDEAA NYLKFLRSQI KALEALGHKS DILNSFPANF SFSPFVNYPF VMQQQPQFTI  420
QNPNIIHQPK S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231235KRRRL
2336341RQRRER
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV42654.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072458.16e-93transcription factor bHLH87 isoform X1
TrEMBLA0A2Z7C7030.0A0A2Z7C703_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43502242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.13e-65bHLH family protein