PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV42754.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 289aa    MW: 32180.1 Da    PI: 7.0029
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV42754.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.71.2e-33108166159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk+s+fprsYYrCts++C vkk+vers+edp++v++tYeg+H h+
  KZV42754.1 108 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSTSCGVKKRVERSSEDPSIVVTTYEGTHVHP 166
                 59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-3493168IPR003657WRKY domain
SuperFamilySSF1182902.75E-29100168IPR003657WRKY domain
PROSITE profilePS5081131.651103168IPR003657WRKY domain
SMARTSM007747.2E-39108167IPR003657WRKY domain
PfamPF031066.5E-27109166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009624Biological Processresponse to nematode
GO:0009733Biological Processresponse to auxin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MLNSFQDLSK PTSIFDDLLQ SITAPPPQQR IAEVIDAPAT PNSSSISSSS TEAAGVNDDP  60
KKAETVEEEE EEDQDKANDG RLKPKKKNQK RQREPRFAFM TKSEIDHLDD GYRWRKYGQK  120
AVKNSPFPRS YYRCTSTSCG VKKRVERSSE DPSIVVTTYE GTHVHPCPMT PRGCSFGILP  180
PEAATLGNIG GGATGVSASH LVVPQIFHLY QQQQHHQQQQ IQPYFHNLTP PTLAPTTNFN  240
TSSTISSFPL PTLIRERPFC PSPPSLARDH GLLQDMLPSQ ILLKEPKEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-271011681077Probable WRKY transcription factor 4
2lex_A5e-271011681077Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00069PBMTransfer from AT2G47260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV42754.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100744.26e-91probable WRKY transcription factor 48, partial
TrEMBLA0A2Z7C7960.0A0A2Z7C796_9LAMI; Putative WRKY transcription factor 48
STRINGMigut.N00035.1.p1e-83(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13092479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.11e-53WRKY DNA-binding protein 23