PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV43512.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 350aa    MW: 38949.4 Da    PI: 9.4492
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV43512.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix63.16.4e-2046136186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 
                 +W+ +e+ +Liea++e++ +lrrg+l++++W+ev++ +    +    ++++qC++k+e+l+kry+++ +++  +    +  s++++f++++
  KZV43512.1  46 CWSPEETSVLIEAYKEKWYSLRRGNLRANHWQEVADDVasrFQSSPPKTAVQCRHKMEKLRKRYRAEIQRAAAHggVRGFPSSWAHFQSMH 136
                 7*************************************7665666799*******************999988855699999*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.0E-2245138No hitNo description
PROSITE profilePS500906.74847106IPR017877Myb-like domain
SMARTSM005952.4E-1154143IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MTTIVSNSSS PYDDDNIPTA TLALPSAASA SASASASASR RLPPPCWSPE ETSVLIEAYK  60
EKWYSLRRGN LRANHWQEVA DDVASRFQSS PPKTAVQCRH KMEKLRKRYR AEIQRAAAHG  120
GVRGFPSSWA HFQSMHAMEK GSNNRPSPPS TDDDEEESDH KNSIKRINNL YNNQMGNFSN  180
QGPISNGAAS GFRIKIPGMV PAGPAETKLH GNYNDIGDQN HYNRNPRFVN SVNSGYGAAH  240
SRTMRDGYFG QHEMGKRVSE ISKGDSGVTE VVEAIQALGE GFVRIEQVKM DMARQVEEMR  300
MEMELKRTQM ILESQQRIVE AFANTISERT NKKAKRTSTP ECSNEVGARR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV43512.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093230.11e-168trihelix transcription factor ASIL2
TrEMBLA0A2Z7C9T30.0A0A2Z7C9T3_9LAMI; Uncharacterized protein
STRINGMigut.N01727.1.p1e-132(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80282327
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-54Trihelix family protein