PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV44776.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

G2-like

Protein Properties

Length: 263aa MW: 28922.6 Da PI: 7.1983

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV44776.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.7e-34	18	72	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHe+Fv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl KZV44776.1 18 KQRLRWTHELHEQFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.516	15	75	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.2E-32	17	73	IPR009057	Homeodomain-like
SuperFamily	SSF46689	9.32E-18	17	72	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.7E-25	18	73	IPR006447	Myb domain, plants
Pfam	PF00249	1.2E-9	20	71	IPR001005	SANT/Myb domain
Pfam	PF14379	3.8E-23	105	151	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence Send to blast
MDNVSGENNM SNTSMAAKQR LRWTHELHEQ FVDAVAQLGG PDRATPKGVL RVMGVQGLTI 60 YHVKSHLQKY RLAKYLPDSS SDEGKKVEKK EPGDALSSLD GSSGIEINEA LKLQMEVQKR 120 LHEQLEVQRQ LQLRIEAQGK YLEKIIEEQQ RLSGVFTAIP DSVVATSGTC NNCPDSDNKI 180 LTHPPTPAPT SESRLLNKAV KERSPAKSLS IDESLSNHEP LTPDSICPVT SPVESPSERS 240 GKKQRTSTAP AFSEPGTILS VRY

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	7e-24	17	75	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV44776.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020554068.1	1e-130	uncharacterized protein LOC105175200
Swissprot	Q9SJW0	1e-108	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2Z7CJ24	0.0	A0A2Z7CJ24_9LAMI; Transcription factor
STRING	XP_002525238.1	1e-129	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2796	24	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-85	G2-like family protein