PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45683.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family FAR1
Protein Properties Length: 160aa    MW: 18438.1 Da    PI: 10.6267
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45683.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.42.7e-1473123148
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...t 48 
                 +fYn+YA ++GFsvrk++ ++sk +g + +r+++C +eg+r+++k+    +
  KZV45683.1  73 EFYNSYAGRMGFSVRKDYVNRSKIDGAVASRRYTCFREGYRQKDKRGfkvK 123
                 6******************************************99884330 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-1173119IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MTITRQPNGK YRVIHFETNH NHIFVTPLTA RLLPSQKRIS FVEAVQAESA SNSVPYGIPK  60
LGMGFDSEDH AYEFYNSYAG RMGFSVRKDY VNRSKIDGAV ASRRYTCFRE GYRQKDKRGF  120
KVKRPRFISM NQVEVDAPRI ERRLIRCQGL TMARHCGVGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45683.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022895081.13e-71protein FAR1-RELATED SEQUENCE 7-like
TrEMBLA0A2Z7CGB51e-116A0A2Z7CGB5_9LAMI; Far1-related sequence 5 isoform 1
STRINGMigut.H00048.1.p6e-64(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30211740
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.15e-14FAR1-related sequence 12