PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45804.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 80aa    MW: 9044.61 Da    PI: 9.861
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45804.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.81e-1713561255
     G2-like 12 erFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                + F + v+qLG +++AtPk  l++++v+gLt++hvk HLQkYRl
  KZV45804.1 13 QLFKQTVAQLGIPDRATPKCALRIVGVQGLTIYHVKIHLQKYRL 56
                568899*************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.3E-161057IPR009057Homeodomain-like
SuperFamilySSF466894.3E-71157IPR009057Homeodomain-like
TIGRFAMsTIGR015573.9E-131257IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
MEGVLFCKPH FEQLFKQTVA QLGIPDRATP KCALRIVGVQ GLTIYHVKIH LQKYRLAKYL  60
PDSSSDGTKP DKKKSEDMLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45804.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615786.18e-30PREDICTED: myb family transcription factor PHL7-like
RefseqXP_009787053.19e-30PREDICTED: myb family transcription factor APL-like
RefseqXP_019233882.18e-30PREDICTED: myb family transcription factor PHL7-like
SwissprotQ9SJW09e-29PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2Z7CMH62e-52A0A2Z7CMH6_9LAMI; Uncharacterized protein
STRINGXP_009787053.14e-29(Nicotiana sylvestris)
STRINGXP_009615786.13e-29(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.14e-31G2-like family protein