PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45956.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 199aa    MW: 23030.9 Da    PI: 5.8994
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45956.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.82.2e-19863156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                + +R++f++eq++ Le++F  ++ p  + +  LA+klgL+ rqV +WFqN+Ra+ k
  KZV45956.1  8 KNNRRRFSDEQIRSLETMFDAESRPELRLKMNLANKLGLQPRQVAIWFQNKRARSK 63
                678***************************************************99 PP
2HD-ZIP_I/II105.83.3e-3410101293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ++rr+s+eq+++LE++F++e++ e + K++la++Lglqprqva+WFqn+RAR k+k++E++y +Lk+++d+l+++ + L+ke+++L  +l++
   KZV45956.1  10 NRRRFSDEQIRSLETMFDAESRPELRLKMNLANKLGLQPRQVAIWFQNKRARSKSKHIETEYGVLKTKFDELSSQFDILRKENQALLIQLQR 101
                  68************************************************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.28E-17574IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.7E-18570IPR009057Homeodomain-like
PROSITE profilePS5007118.107565IPR001356Homeobox domain
SMARTSM003891.7E-16769IPR001356Homeobox domain
CDDcd000864.89E-14866No hitNo description
PfamPF000468.9E-17863IPR001356Homeobox domain
PROSITE patternPS0002704063IPR017970Homeobox, conserved site
PfamPF021831.3E-1365105IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MSTIKRSKNN RRRFSDEQIR SLETMFDAES RPELRLKMNL ANKLGLQPRQ VAIWFQNKRA  60
RSKSKHIETE YGVLKTKFDE LSSQFDILRK ENQALLIQLQ RLKSMAGQKD DEIPDDYEDR  120
IKIASESPEA QREAHSNELF MPSCGDAGKR VDSMETEFLN MAQDSLTSPD TGCSFDSCTF  180
LDNPGYSSQW WDFKFCPPA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00320DAPTransfer from AT2G46680Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45956.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842101.18e-68PREDICTED: homeobox-leucine zipper protein ATHB-12-like
SwissprotP468972e-38ATHB7_ARATH; Homeobox-leucine zipper protein ATHB-7
TrEMBLA0A2Z7CME41e-146A0A2Z7CME4_9LAMI; Homeobox-leucine zipper protein ATHB-7-like
STRINGMigut.E00626.1.p3e-67(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA102732125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.16e-41homeobox 7
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]