PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV46329.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family AP2
Protein Properties Length: 387aa    MW: 43739.2 Da    PI: 9.2334
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV46329.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.55.7e-1266122155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+++GV+++k++gr++A+++d  ++n   k+k  + g ++ +e Aa+a++ a++k++g
  KZV46329.1  66 SRFRGVSRHKWTGRYEAHLWDkLTWNVtqKKKGKQ-GAYDDEEAAARAYDLAALKYWG 122
                 789******************77777784446666.99***9**************98 PP
2AP250.84.3e-16165216155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  KZV46329.1 165 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 216
                 89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-866122IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-1566131IPR016177DNA-binding domain
SMARTSM003802.6E-1967136IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-1167130IPR001471AP2/ERF domain
PROSITE profilePS5103218.41367130IPR001471AP2/ERF domain
PRINTSPR003672.4E-56879IPR001471AP2/ERF domain
PfamPF008471.2E-11165216IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-17165226IPR016177DNA-binding domain
CDDcd000184.72E-24165226No hitNo description
SMARTSM003802.5E-25166230IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-18166225IPR001471AP2/ERF domain
PROSITE profilePS5103218.676166224IPR001471AP2/ERF domain
PRINTSPR003672.4E-5206226IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MAMKMIKSDP YLRRDIVSMM DGEAPAVMPV KRRKRDAVAL ELGCDNQQTP NQQVDPTSAA  60
TVKRSSRFRG VSRHKWTGRY EAHLWDKLTW NVTQKKKGKQ GAYDDEEAAA RAYDLAALKY  120
WGTSTLTNFP ITDYEKEIEI MQTLTKEEYL ASLRRKSSGF SRGVSKYRGV ARHHHNGRWE  180
ARIGRVFGNK YLYLGTYSTQ EEAAHAYDIA AIEYRGINAV TNFDLSTYIR WLKPGANSSV  240
PDKKTTPCQD SPAIFSNFQT GEESLSPFLK RRAFSADDLS KQERFAKKVP VSPSTKSSPT  300
ALGLLLRSSV FKELVEKNSN VEEENISNQK SEDRLPELGE ILYDGIEDRG FVFSSNANNF  360
ELQGPLHFNY DCADMIGSNT IGMATIF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV46329.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098579.11e-171AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A2Z7CNN20.0A0A2Z7CNN2_9LAMI; Uncharacterized protein
STRINGVIT_14s0108g00050.t011e-161(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34402145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.38e-79AP2 family protein