PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV46864.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 288aa    MW: 32265.9 Da    PI: 5.3959
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV46864.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.22.5e-173382255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L ++++YI+ Lq
  KZV46864.1 33 RSKHSETEQRRRSKINERFQILRDLVPEN----DQKRDKASLLLEVIQYIQFLQ 82
                899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.6E-2330103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.8793181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-1932106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.40E-163386No hitNo description
PfamPF000106.6E-153382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.5E-153787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MVRIASHVEH QEAPDCSSPT ERVRVDEKVD ASRSKHSETE QRRRSKINER FQILRDLVPE  60
NDQKRDKASL LLEVIQYIQF LQEKLQMYEG SYQGWSQEPT KLAPWKINSG PVESFLDQNQ  120
LERHISGHED NGVLNPSRHV RNSAESELIG SSLYKSTDSL SIATNQPLLL NLPTQAATFE  180
SMSAQPHQEC FPDAEQLTQL LQSQSWPGRS CVDDFSIPIC NLNGSEPKTE SGEASHSSTY  240
SQLVLGSLKN ALQSSGVDLS QASISVQLDV GKQINDRSTL TKFTMKVL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV46864.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085580.11e-132transcription factor BIM2 isoform X2
TrEMBLA0A2Z7CQF90.0A0A2Z7CQF9_9LAMI; Uncharacterized protein
STRINGMigut.H00581.1.p1e-105(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA89471821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-50BES1-interacting Myc-like protein 2