PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV47480.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 519aa    MW: 56599.6 Da    PI: 5.7696
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV47480.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.6e-09336384355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  KZV47480.1 336 NSHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 384
                 58*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.16E-11331388No hitNo description
SuperFamilySSF474594.19E-17331402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.478333383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-17334400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-6336384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.5E-10339389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MNTSCRDNNQ EQEKMNEDPV NYHAPNAVSE WQINGNNLPN ASVGMTRLGN SMVESNGCST  60
TFLPDSFCPP VWDHPSLGYC DTGIENQAIS SSGLGPVRAG MNWTQNAMLR GGIFLPAVPG  120
MVPPSLPHFP TDPAFIERAA RFSCFSGGHF SEMVNPFSTP DHLNPYSRGF GPLQRPNDVT  180
VGVLEQALVP GEHSIEGTSL KNERKGLSFR QSYDEAKHGV DVSANVSDEA EFSGRGAREE  240
LADAAEDSCG TGLGSNKRKR TLPVTQDTEY NEIVRTPPLP SIELVKDQDE TKLKGDQNPA  300
STGKPGGKHG TQDSQGSDMP KEGYIHVRAR RGQATNSHSL AERVRREKIS ERMKFLQDLV  360
PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPR LDFNIEALLA KDILQPRAGM  420
PSSPALPLDM TMPFPPLHSS QPGLIQASLP CSETLRRPIN LQSVALAQVP GVWDGELHNI  480
VHMGFNTSSP LNGRDLSVKL KQLFVFSEIS CSLSEGIND
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV47480.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077884.10.0transcription factor bHLH49
TrEMBLA0A2Z7CK730.0A0A2Z7CK73_9LAMI; Uncharacterized protein
STRINGPOPTR_0010s14600.11e-164(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28712150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.26e-99bHLH family protein