PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV47605.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 386aa    MW: 42905.2 Da    PI: 7.6086
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV47605.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-10224271455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P++    +k   Ka iL + ++Y++sLq
  KZV47605.1 224 SHSLAERARREKISKKMKCLQDLVPSC----NKVTGKAGILDEIINYVQSLQ 271
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.13E-9218275No hitNo description
SuperFamilySSF474592.62E-16218287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-17220281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.275220270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.3E-8224271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10226276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MVARGTLGST LHPFSAPSPH HFHHHLLSFS AFHLYKAFYP PSSLPHIIHF LKTPPCLIMD  60
ISVFQRQKVI LQRLHCSKNQ EDRHHARVNL HSAFDHHQQI SSNCWRPIKT ASSATNQPCF  120
SAVSSSNNSC MESVTIPKTD GQCNSDSGGT VSCSVTKRKA AEFSPEDEGK GKGLVAEEAG  180
DEKSEITTKN ELEFSTNTCS KEGSKVPKPD YIHVRARRGQ ATDSHSLAER ARREKISKKM  240
KCLQDLVPSC NKVTGKAGIL DEIINYVQSL QKQVEFLSMK LAVSNPHLEF SVDDFFTKEM  300
PAYVTKTPQT PAATEFEPTN SACFQYNPNR GTDVRPNESQ MTTQDAGSSS VPAPEVFLDP  360
TSIPQFLQIS GWDSEFSNLF NTGFHY
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV47605.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099632.11e-104transcription factor BEE 2
TrEMBLA0A2Z7CMM10.0A0A2Z7CMM1_9LAMI; Basic helix-loop-helix DNA-binding superfamily protein isoform 1
STRINGMigut.O00889.1.p3e-86(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.14e-53BR enhanced expression 2