PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV48208.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 217aa    MW: 24870.2 Da    PI: 10.767
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV48208.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.3e-0664111355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++h + Er RR+  +  +  L ellP+      +K +  +iLe +++ Ik+Lq
  KZV48208.1  64 KKHVMGERLRRETHRRFYGALHELLPPG-----TKRDQKSILETTIKKIKELQ 111
                 679999********************97.....799999*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-1154124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.01461110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.06E-464115No hitNo description
Gene3DG3DSA:4.10.280.107.1E-765124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.003467116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MNSQSAFSSY TNEPRVGFAS KSNANGSNRE NVHKRMLQFL KKNWSTNGGR TGSTTGEMER  60
GRGKKHVMGE RLRRETHRRF YGALHELLPP GTKRDQKSIL ETTIKKIKEL QKMKEELERR  120
NNEVEIILGA RENEVTLEKA EIELKVGNPA SGIDSMLEVL RSLKYTNSTA TAMHSNFSQR  180
QFSAKLEIET KMRAADVERE VRRSLFQVET KFHRSGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV48208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091133.13e-67transcription factor bHLH92 isoform X2
TrEMBLA0A2Z7CN101e-157A0A2Z7CN10_9LAMI; Basic helix-loop-helix DNA-binding superfamily protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA124631821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-36bHLH family protein