PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV48733.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bHLH

Protein Properties

Length: 378aa MW: 41249.1 Da PI: 7.8168

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV48733.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.4	6.8e-05	305	328	6	29
HHHHHHHHHHHHHHHHHHHCTSCC CS HLH 6 nerErrRRdriNsafeeLrellPk 29 +++Er RR ri +++ +L++l P+ KZV48733.1 305 SIAERMRRTRISEKMKKLQDLFPN 328 689******************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	4.4E-4	304	331	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence Send to blast
MSRNGSSSSF LFPNSSGIIK NVSSEGGFLR SKESMGGSDL FGNQQNQEHC CGLARYRTAP 60 GSFLATLLES TTDNHGSSGD DSEALFSAFM DNGHLDLNQM QCSMKQEIGR EMGYGGSYSL 120 GMDSQAHKVS SNGGSNLARQ TSSPAGFLSG LGSMGGVGNF GIQSHAEPNS SRGMNSQINF 180 SSTPSSTTSR FMPTIPENCN ESIVTTSSED KRSAQIIGSG EYEPWNDSSF NGLKRTRNGD 240 LKMFSSFNGL ENQNEETRKK SPGLVHHLSL PNTSTCEMQK FLHFQQDSVP CQIRAKRGFA 300 THPRSIAERM RRTRISEKMK KLQDLFPNMD KECVIVISPW SGAVHVPGDL HPMPVESPLR 360 LMGRCYVLVI QVWGFAHA

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence Send to blast

MSRNGSSSSF LFPNSSGIIK NVSSEGGFLR SKESMGGSDL FGNQQNQEHC CGLARYRTAP  60
GSFLATLLES TTDNHGSSGD DSEALFSAFM DNGHLDLNQM QCSMKQEIGR EMGYGGSYSL  120
GMDSQAHKVS SNGGSNLARQ TSSPAGFLSG LGSMGGVGNF GIQSHAEPNS SRGMNSQINF  180
SSTPSSTTSR FMPTIPENCN ESIVTTSSED KRSAQIIGSG EYEPWNDSSF NGLKRTRNGD  240
LKMFSSFNGL ENQNEETRKK SPGLVHHLSL PNTSTCEMQK FLHFQQDSVP CQIRAKRGFA  300
THPRSIAERM RRTRISEKMK KLQDLFPNMD KECVIVISPW SGAVHVPGDL HPMPVESPLR  360
LMGRCYVLVI QVWGFAHA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV48733.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087339.1	1e-115	transcription factor bHLH130
TrEMBL	A0A2Z7CPN9	0.0	A0A2Z7CPN9_9LAMI; Uncharacterized protein
STRING	Migut.B01333.1.p	3e-89	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4435	22	38

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	4e-32	bHLH family protein