PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV49476.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

FAR1

Protein Properties

Length: 192aa MW: 22056.1 Da PI: 5.6842

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV49476.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29	3.5e-09	141	186	2	47
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 Y++YA+ GFsvrk +++ ++++ei +++f Cs +g ++e++++ KZV49476.1 141 LYCQYAHAKGFSVRKGEQRCFSHSKEIQSKEFSCSYKGLKDEKRSS 186 59*************************************9998766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.8E-7	141	186	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence Send to blast
MSFIAVNLPD FIDRLLIKSQ YIAIAVKGSK VSDLRIYGIE DPVTPFYLWY RGPGHSGRDT 60 ITVGPWLYSK MEVEDLLSLE ELEENHIEEV VCREFSTTRF GLPNFSRSEI EVPTENSIVD 120 VLKSKLEVGS IVNNLEEAYL LYCQYAHAKG FSVRKGEQRC FSHSKEIQSK EFSCSYKGLK 180 DEKRSSKHIF NE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV49476.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7CXB3	1e-139	A0A2Z7CXB3_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16786	2	3