PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV49650.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 337aa    MW: 38663.8 Da    PI: 9.4194
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV49650.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.38.2e-2961114255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 prlrWtp+LH  F +ave+LGG+++AtPk +l+lm++kgL ++hvkSHLQ+YR+
  KZV49650.1  61 PRLRWTPDLHLLFEQAVERLGGKDRATPKLVLQLMNIKGLDIAHVKSHLQMYRS 114
                 8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-2757115IPR009057Homeodomain-like
PROSITE profilePS5129411.61557117IPR017930Myb domain
SuperFamilySSF466896.09E-1460115IPR009057Homeodomain-like
TIGRFAMsTIGR015574.6E-2161116IPR006447Myb domain, plants
PfamPF002498.7E-962113IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEGSGVTYCD SKVTSPYGED KCVAMSEGRK LEDGGSSSNS TVEEISNIKS SVRPYVRSKL  60
PRLRWTPDLH LLFEQAVERL GGKDRATPKL VLQLMNIKGL DIAHVKSHLQ MYRSKKVEEP  120
NQGMIDHRLL EDRMNRNVYN TSQLPTLSSF HQRLQYYSNF RYGGNDSRNG NGKWMDDCTI  180
GQGNICNKTI PGFYSSTLRD RISSSHCFRP KQVDFCPRIR SYEYSKDEFG SLQKQETWSC  240
QSREPLIEFH SVKQSCNEPP RSSQQMIIRK DQMGFKREAE DSEVDLNLSL VLKSGDSKKR  300
REESLLGTQS SLKQMKKMKQ DFIAQKARFP STLDLTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-1662116357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1662116357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1662116357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1662116357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV49650.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095220.12e-86uncharacterized protein LOC105174731
TrEMBLA0A2Z7CRE00.0A0A2Z7CRE0_9LAMI; Uncharacterized protein
STRINGMigut.J00123.1.p7e-74(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43822141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.15e-48G2-like family protein