PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV49652.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 147aa    MW: 16860.8 Da    PI: 7.057
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV49652.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-105091854
                HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                + rrRR+ri ++f  L++l+P        K++ +++Le+A++Y+k L
  KZV49652.1 50 AARRRRHRISNRFKILQSLVPGG-----SKMDTVSMLEEAIQYVKFL 91
                569******************95.....5****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.9044291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-1647107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-1447102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-144897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-85191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.65E-95896No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006790Biological Processsulfur compound metabolic process
GO:0009150Biological Processpurine ribonucleotide metabolic process
GO:0046983Molecular Functionprotein dimerization activity
GO:0047627Molecular Functionadenylylsulfatase activity
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MDSPSFPNPS TSTECTSINN GKEESIRKYN KKKTNTSAPL KLSTDPQSVA ARRRRHRISN  60
RFKILQSLVP GGSKMDTVSM LEEAIQYVKF LKEQISWLHQ QAMVSESVIP IHHHQEFDLP  120
NDYTEDQVQA VNEDYWFQCG ENVAFNS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV49652.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018859333.18e-36PREDICTED: transcription factor bHLH140-like
TrEMBLA0A2Z7CRG71e-107A0A2Z7CRG7_9LAMI; Uncharacterized protein
STRINGXP_010092808.11e-32(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117141723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.14e-24APRATAXIN-like