PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV49697.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 228aa    MW: 25402.6 Da    PI: 6.0952
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV49697.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.60.000263279253
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                +  + erE+  Rd++N+ f  L ++l  +    ++ + Ka++L+ +++ + +
  KZV49697.1 32 KIHKAEREKLKRDHMNELFVDLSKVLDLN----HPSNGKASMLRDTIRLLAE 79
                667889****************9998776....8889999999999987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.36E-52884No hitNo description
SuperFamilySSF474597.2E-112894IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-73098IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.0453080IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MGSEAGDSII DLVNVTTRLC PRKRNPNKVP RKIHKAEREK LKRDHMNELF VDLSKVLDLN  60
HPSNGKASML RDTIRLLAEL LAQVDHLKKE NAALLSESNY VTVEKNELVE ENSALGTQIK  120
KLQNEIDEME NCSNSDYSRQ PQSNGVAPAS EDHVAVPLLH NASDSNSVLG PIFVMPLHPD  180
SQVYPKPYSE TNTSMVSGVS RPEPRYPSSS DSWPLHILTK QANMAEDV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV49697.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098609.13e-87transcription factor bHLH47 isoform X1
RefseqXP_011098610.19e-88transcription factor bHLH47 isoform X2
TrEMBLA0A2Z7CUN81e-166A0A2Z7CUN8_9LAMI; Uncharacterized protein
STRINGMigut.H00911.1.p3e-81(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43071934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.34e-43bHLH family protein