PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV49778.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Dof

Protein Properties

Length: 334aa MW: 36679.9 Da PI: 8.7088

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV49778.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.6	7.6e-40	34	91	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +alkcprCdstntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk+ KZV49778.1 34 AALKCPRCDSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKM 91 679*****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-27	34	90	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.7E-33	35	90	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.749	36	90	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	38	74	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence Send to blast
MSHADKNILA GKDESKGSTS RRSAATKPQE ASSAALKCPR CDSTNTKFCY YNNYNLTQPR 60 HFCKTCRRYW TKGGALRNVP IGGGCRKNKK MKPFQRVPGD PKEENGSSDM GGFRIFQGIS 120 PAMDFQLGGL NFPRLQPSTT TNLFNQFPSC GNLANICGTT SSGPHLILDP SPTSSPHLGL 180 ITSTQGFQEM AGSLNLRSNL ASSIESLSSI NQDLHLKLQQ QRLSMMYVGN NQKENSANIP 240 SESDHIIEPL VQKPQPILFQ NLDIYKQDYS NAIGISRKEG ADEHLSTEWF FDNSYATVTP 300 SAPATSRSYA NESTGNWSGS QAWSSDLSQY NSLP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV49778.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022842998.1	1e-123	dof zinc finger protein DOF5.7-like
TrEMBL	A0A2Z7CSS4	0.0	A0A2Z7CSS4_9LAMI; Dof-type zinc finger DNA-binding family protein
STRING	EOX91892	1e-116	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5242	22	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	2e-45	Dof family protein