PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV50563.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

HSF

Protein Properties

Length: 252aa MW: 28594.4 Da PI: 6.404

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV50563.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	103.1	2.4e-32	39	132	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y+i++d+e++++isws++g+sf+++d+ +f+ ++Lp yFkh+ ++SFv QLn YgF+kv e++ we+++++F++g++ +l++i+ KZV50563.1 39 FLIKIYSIVNDPETNSIISWSSSGTSFIIWDHLRFSAEILPMYFKHNILSSFVSQLNNYGFRKVGVEHQ--------WEYENPYFQAGNEYMLSNIR 127 9**************************************************************9994........****************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+ s+ KZV50563.1 128 RRLSN 132 *9775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46785	1.33E-29	35	129	IPR011991	Winged helix-turn-helix DNA-binding domain
SMART	SM00415	1.5E-46	35	129	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Gene3D	G3DSA:1.10.10.10	2.8E-32	36	129	IPR011991	Winged helix-turn-helix DNA-binding domain
PRINTS	PR00056	9.8E-17	39	62	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Pfam	PF00447	8.3E-28	39	129	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	9.8E-17	77	89	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	9.8E-17	90	102	IPR000232	Heat shock factor (HSF)-type, DNA-binding

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence Send to blast
MISGDIEGGG VGAASPTLSG DIDISECLKG IMGSMPPPFL IKIYSIVNDP ETNSIISWSS 60 SGTSFIIWDH LRFSAEILPM YFKHNILSSF VSQLNNYGFR KVGVEHQWEY ENPYFQAGNE 120 YMLSNIRRRL SNKIQIQNRK KKGSCIVSIA NDMETKLQSL RDEIKISKLG IQMLEKQQED 180 MESVISTLEA DMNHTRNESY TLLRILCEKG EEIIARKMSE EAHSTDGFGE KRKYDHTHEN 240 SSTDKKQKTV AN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5d8k_B	2e-26	37	132	3	108	Heat shock factor protein 2
5d8l_B	2e-26	37	132	3	108	Heat shock factor protein 2
5d8l_D	2e-26	37	132	3	108	Heat shock factor protein 2
5d8l_F	2e-26	37	132	3	108	Heat shock factor protein 2
5d8l_H	2e-26	37	132	3	108	Heat shock factor protein 2
Search in ModeBase

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	126	141	RRRLSNKIQIQNRKKK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV50563.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022893710.1	3e-62	heat stress transcription factor A-7a-like
TrEMBL	A0A2Z7CUT1	0.0	A0A2Z7CUT1_9LAMI; Heat stress transcription factor A-2-like
STRING	Migut.H01517.1.p	7e-46	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13740	9	10

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	5e-28	heat shock transcription factor A2