PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51075.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HSF
Protein Properties Length: 404aa    MW: 45973.2 Da    PI: 4.7535
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51075.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.41.2e-34141052102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+ye+++d+++++l+sws n++sf+v ++ efa+++Lpk+Fkhsnf+SF+RQLn+YgF+kv+ e+         weF+++ F +g+ +ll +i+
    KZV51075.1  14 FLAKTYEMVDDPSTDSLVSWSPNNKSFIVQNPPEFARDILPKFFKHSNFSSFIRQLNTYGFRKVDPEQ---------WEFANEDFVRGQPQLLLNIH 101
                   9***************************************************************9998.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    KZV51075.1 102 RRKP 105
                   *985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.101.7E-38597IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467855.44E-359103IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004156.9E-6210103IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004471.1E-3114103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-201437IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-205264IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405377IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-206577IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MDEAPSTSNS LPPFLAKTYE MVDDPSTDSL VSWSPNNKSF IVQNPPEFAR DILPKFFKHS  60
NFSSFIRQLN TYGFRKVDPE QWEFANEDFV RGQPQLLLNI HRRKPVHSHS TPNVATLPAL  120
TESERKGYED DIVRVKGEKE SLQLGLQKRE EEQQGLKVKL RTLTERVQNV EQIHRNMLSS  180
LARVLHEPAV ALDLMTQNEA HDRKRRFPGN SFFSDERIMD DNQGVSSQIS SMEHTDVNAL  240
IALNIEVLEQ LDSSLMMWEK IVFDAREGLP QNYSSLGFDE STNCAPSPTI SYTRLNVDIE  300
STTTVIDMNS EPNSAVVPEE QPPLEEQRAG TATTAKAGVN DVFWEQFLTE NPGSNDSSES  360
WKKSEEEGKR KEQKPVDRGM YWWNIKSVTN LAEQLGHLTS VEKT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B1e-25910324129Heat shock factor protein 1
5d5v_B1e-25910324129Heat shock factor protein 1
5d5v_D1e-25910324129Heat shock factor protein 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00443DAPTransfer from AT4G18880Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51075.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101446.10.0heat stress transcription factor A-4a
RefseqXP_011101447.10.0heat stress transcription factor A-4a
TrEMBLA0A2Z7CXK40.0A0A2Z7CXK4_9LAMI; Heat stress transcription factor A-4a-like
STRINGMigut.M00999.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34482344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.11e-102heat shock transcription factor A4A