PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51080.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 312aa    MW: 34577.4 Da    PI: 5.3301
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51080.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-3078136259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+
  KZV51080.1  78 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPNMLVVTYSCEHNHP 136
                 69*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-3173138IPR003657WRKY domain
SuperFamilySSF1182906.67E-2675138IPR003657WRKY domain
SMARTSM007742.6E-3677137IPR003657WRKY domain
PROSITE profilePS5081132.60478138IPR003657WRKY domain
PfamPF031069.6E-2679136IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MTRVNNTRLV SELVDSEDSP ENSGDSPRSA VSGDIKTAST SSSRRSRRGG IQKRVVSVPI  60
KDVEGLKLKG DHMTAPPSDS WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRV  120
DPNMLVVTYS CEHNHPLPAS RHNNPNPNHK KSNSSSSASA AAAAAASTSL TASVSEEDEE  180
EQDEEQEEQK MKRVINPSKD QSQEIIEEVK FSDLCEGPMI TNGSEFGWFS DFESTSCTML  240
ESPIVTEDRI ATDNEMAMIF TMREEDESLF ADLGELPECS TVFRRGMAQK EAEKRRHSGD  300
KTMCLPQICL PS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-2253138679Disease resistance protein RRS1
5w3x_D3e-2253138679Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51080.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101421.11e-120probable WRKY transcription factor 65
TrEMBLA0A2Z7CVE30.0A0A2Z7CVE3_9LAMI; WRKY transcription factor 5
STRINGXP_009595576.11e-102(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64752333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.11e-58WRKY DNA-binding protein 69