PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV51106.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

WOX

Protein Properties

Length: 292aa MW: 31986.7 Da PI: 6.417

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV51106.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.3e-09	3	40	24	57
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +p ++e++++ +l ++ +++V++WFqNr+ + k+ KZV51106.1 3 NPPRDEIRKIRVQLqeygHVGDANVFYWFQNRKSRSKH 40 7999*******************************995 PP
2	Wus_type_Homeobox	66.6	4.7e-22	1	42	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+++ei++i+ +L+eyG+++d+NVfyWFQNrk+R+++kq KZV51106.1 1 MVNPPRDEIRKIRVQLQEYGHVGDANVFYWFQNRKSRSKHKQ 42 78**************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.28E-6	3	46	IPR009057	Homeodomain-like
Pfam	PF00046	2.2E-6	3	40	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	8.5E-4	8	46	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence Send to blast
MVNPPRDEIR KIRVQLQEYG HVGDANVFYW FQNRKSRSKH KQRQQQNISK SKQQNAPSPT 60 TSPNVASQIP ISSSSYSDKS APNDSAEKAL SVCSSTVNID MINSSPTASV NQSFLPTSNE 120 FLAEPFFFPV HPNSAGGPSA ASAAALASGF FSSDISRDHH GSSFPVSELM LMNNDYLKKA 180 EEINLQQLLC DSAAKAPVNA GDAIFTPSLA VPFPNHVNLH EGDREMGPTK STVFINDVCF 240 EVGSDPFNVR QAFGDDAVLL QSSGQPVLTN EWGITLQPLS HGHFYYLLRL IW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV51106.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011086022.1	2e-95	WUSCHEL-related homeobox 8-like isoform X1
TrEMBL	A0A2Z7D1S3	0.0	A0A2Z7D1S3_9LAMI; Homeobox-3
STRING	EOY28117	8e-74	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5942	23	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45980.1	3e-17	WUSCHEL related homeobox 8