PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51892.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 219aa    MW: 25131.5 Da    PI: 7.1168
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51892.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-1087130853
                 HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                  ErrRR+++ + ++ Lr+llP  +    ++K s ++   +Av+YI +
  KZV51892.1  87 HERRRRNEMANLYASLRTLLPFeC---IKGKRSISDHIHEAVNYIEH 130
                 6*********************88...******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.48779131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-786130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-686149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.29E-1086150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MFDLRSGDEL CFVVNSTTQQ EDELSFGDVM PDQAFLGCKI NPTTATATSS TTTATQKQRF  60
VEFGVDQGGE TEKKNELDIM KNERRDHERR RRNEMANLYA SLRTLLPFEC IKGKRSISDH  120
IHEAVNYIEH KKKNIRDLKM RRDQLMERSE LSETPNHSVM VNAETRGVEI LISTCSKNRR  180
FRISTVFVEL METGLNVVAW VTTEANGKFI HKIQAEVLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51892.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7CXP81e-162A0A2Z7CXP8_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.17e-25bHLH family protein