PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51927.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 353aa    MW: 38084.7 Da    PI: 5.2412
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51927.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.48.1e-25185245259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg++W+KYGqKe+ g  +prsYY C+++   +Cp+kk+v+r ++dp ++e+tY+++H+++
  KZV51927.1 185 EDGFTWKKYGQKEILGRAYPRSYYICAQQklhSCPAKKQVQRLDHDPFIFEVTYRNSHTCR 245
                 7**************************998999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.2E-25172245IPR003657WRKY domain
SuperFamilySSF1182901.29E-22182246IPR003657WRKY domain
SMARTSM007746.7E-31184246IPR003657WRKY domain
PfamPF031067.4E-23185245IPR003657WRKY domain
PROSITE profilePS5081119.416185247IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEDSLESLIL HGCRLAEILE QNLPILADQP DILVNSCEEI VSAFKNVKER VLSEGHTGVQ  60
ELHGSEVGGV IREHATMASL DPRVITGVGG AYTRRVEDVV PESSEMKRMS LHDQRLGMGL  120
ELMFGEIGGG GGDVMGTGSS GGTGGEISLD FSIASSSQRQ GRKNEIDKVV KRVAAPQMGS  180
DTPPEDGFTW KKYGQKEILG RAYPRSYYIC AQQKLHSCPA KKQVQRLDHD PFIFEVTYRN  240
SHTCRVTSAA TVQIPPSTTA PPPPPVSPFP TSTIATAQWL SMNMFHHVGG VPDSSAGMLK  300
AGSGGGNSND FQPVAEMADA MFNSGSSSSN SMDLIFSSLD EHKWDSTEEK KDQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-15185245969OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51927.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076813.13e-87WRKY transcription factor 55
TrEMBLA0A2Z7D1240.0A0A2Z7D124_9LAMI; WRKY transcription factor 55
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA92801824
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-33WRKY DNA-binding protein 55