PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51952.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 197aa    MW: 22140.8 Da    PI: 10.7257
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51952.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-202171256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a+++a+++++g+
  KZV51952.1 21 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDEAARQFRGH 71
                58*******.**********8...557*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.5E-382184IPR001471AP2/ERF domain
PfamPF008471.9E-142171IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-222178IPR016177DNA-binding domain
CDDcd000189.69E-322178No hitNo description
Gene3DG3DSA:3.30.730.106.6E-332178IPR001471AP2/ERF domain
PROSITE profilePS5103223.5252178IPR001471AP2/ERF domain
PRINTSPR003673.7E-112233IPR001471AP2/ERF domain
PRINTSPR003673.7E-114460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0016604Cellular Componentnuclear body
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MAPRARAAAA LGVRRGDDEM HFRGVRKRPW GRYAAEIRDP GKKSRVWLGT FDTAEEAARA  60
YDEAARQFRG HKAKTNFPPP DSIAQKTSNR SPSQSSTVES SSREAVPPPL DLTLGRRPMR  120
FPFQNNLHLL PPVTSYKPEH TTMLHLGPES RREIADLMNQ FRRVPVDFFH SGSDSDTSTQ  180
HGRVLNLDLN LPPSETS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-212178260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-212178563ATERF1
3gcc_A4e-212178563ATERF1
5wx9_A6e-211678972Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00358DAPTransfer from AT3G15210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51952.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020553968.11e-67ethylene-responsive transcription factor 4-like
TrEMBLA0A2Z7CXV51e-142A0A2Z7CXV5_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000587519e-47(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-26erf domain protein 9