PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV51958.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Dof

Protein Properties

Length: 341aa MW: 37652.2 Da PI: 9.4365

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV51958.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.1e-38	50	109	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ l+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk++ KZV51958.1 50 RQQPLNCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRV 109 67899*****************************************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-28	48	108	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.9E-33	52	108	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.45	54	108	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	56	92	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MLGNCAKKMT ATNQWTMPQD QIIADDQKTF MASTSKGKFM DKASLQDHQR QQPLNCPRCD 60 SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRVR RPSQQASNGG 120 DGISTAYPTA NTSPRIPQQP DLTSAQNHTH SSMFYSLPTD YPGLNFPFAR LSSPRVTSHS 180 HGFDFRLPPI NGLGLGLVPN NEYKDDYNPV KKIVSSSNSS VAIDPIFIGS STFAASTSTM 240 ASLLASSLQR QKYLATGLKD VTPVGSNNFP GLLPFDGMQI PHENGMKERE YRIEGLNRLD 300 WNIYPVDQQI DSTDSASSLL WNAAGSWFDP SNVGSSVPSL I

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV51958.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020554179.1	1e-112	LOW QUALITY PROTEIN: dof zinc finger protein DOF1.4-like
TrEMBL	A0A2Z7CZ08	0.0	A0A2Z7CZ08_9LAMI; Uncharacterized protein
STRING	XP_002509452.1	1e-77	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	2e-35	Dof family protein