PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51986.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB_related
Protein Properties Length: 239aa    MW: 26929.7 Da    PI: 9.2267
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51986.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding461.2e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
       KZV51986.1 14 KGPWTGEEDQKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-20563IPR009057Homeodomain-like
PROSITE profilePS5129419.55965IPR017930Myb domain
SMARTSM007176.2E-121363IPR001005SANT/Myb domain
PfamPF002491.3E-131461IPR001005SANT/Myb domain
SuperFamilySSF466891.7E-181590IPR009057Homeodomain-like
CDDcd001677.26E-101661No hitNo description
Gene3DG3DSA:1.10.10.601.2E-56490IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MGRQPCCDKV GLKKGPWTGE EDQKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SEYEEKMVID LHAKLGNRHT QPATIQDGGY SQGGQQPTEP RPTVTPRRRL  120
HTEVTSSPHQ PSPATPEATT MHRDSPQALE PSPAPTRRSG YTQSWVAYTQ ELQYLLQYMI  180
NRVAYTPRSS DPPINILVID RRTSSLAQTY LSPEDRALDT LTHIPRDILC GSRLGDTPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A7e-151295587B-MYB
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51986.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7D4C21e-176A0A2Z7D4C2_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.18e-60myb domain protein 20