PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV52796.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 423aa    MW: 47273.1 Da    PI: 8.1216
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV52796.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-10250294554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 + + Er+RR+ri++++++Lr l+P+ +      K++  ++L  A  YI +L
  KZV52796.1 250 NLITERNRRKRIKDGIFTLRALVPNiS------KMNRLATLGDAAAYIEEL 294
                 5678*********************66......***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142156.8E-1812158IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000837.15E-9243299No hitNo description
SuperFamilySSF474594.45E-14244312IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.725245294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-12247311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-8249294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-10251300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.49E-4358422No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MAALLEGALN WLRPLVQNKA WDYCIIWKFG NDPSRFIEWG ACCCSGADRF EDIGFVNGGS  60
GLERDECKDT CFRHWVRTKA CEALAQLPSH MPLYSGIHGE VVVTKQPEWI CHANVSASDN  120
VLNGTQVLIP IACGLIELFT ANHVPKNVKI MDYIYTRFRV STKEENIFGD SHDRVNYIEK  180
WSPTSFIPPA SQTCLEGSST GSCLSSDPAL GTMKPKRISR KWADSSSLIL GKRSIKSRQA  240
AENGQYKSKN LITERNRRKR IKDGIFTLRA LVPNISKMNR LATLGDAAAY IEELLEIIEH  300
YENELREMEA EHCGKIYGKS GKENSPAFDL SRGQSGSHEN KPAQAEVEVS QLGTKDFLLK  360
LVCKVRRGGF SRLMEAMDSL GLQVRDANVT TFNGSVLNVL RVEANHMEIE PKTLKNSLIQ  420
LLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV52796.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080803.11e-162transcription factor bHLH90
TrEMBLA0A2Z7D6S90.0A0A2Z7D6S9_9LAMI; Uncharacterized protein
STRINGMigut.D00743.1.p1e-139(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99292227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.13e-67bHLH family protein