PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV52968.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 194aa    MW: 22371.5 Da    PI: 9.4121
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV52968.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.66.2e-33101301128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 l pG+rF+P+d+el++eyLkkk+++++ ++   i +++iyk  P++L +   + ee ewyf ++r++        +r++ +gyWka g++k++++ ++ 
  KZV52968.1  10 LSPGYRFSPKDHELINEYLKKKIDSQTDPCL-NIFTTNIYKNSPRELTAlYPSMEEGEWYFLTPRNRG------DQRVAGNGYWKAYGTEKQIHH-NNI 100
                 579************************9994.59999**********9524444666*******9885......57999****************.999 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +g k++L fy+g+ pk++k++Wv++ey++
  KZV52968.1 101 CIGSKRSLKFYEGKPPKSKKSNWVIEEYAV 130
                 9***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-417154IPR003441NAC domain
PROSITE profilePS5100539.79810155IPR003441NAC domain
PfamPF023652.5E-2112129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MDSTGLVLSL SPGYRFSPKD HELINEYLKK KIDSQTDPCL NIFTTNIYKN SPRELTALYP  60
SMEEGEWYFL TPRNRGDQRV AGNGYWKAYG TEKQIHHNNI CIGSKRSLKF YEGKPPKSKK  120
SNWVIEEYAV DKQQEDAINM MQIHEDYVLC RIRMSLRSKK EAAASKSCET KKQKAKSSRL  180
PLIHEDDGLS LSTK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-27815213165Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV52968.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7D6T01e-143A0A2Z7D6T0_9LAMI; NAC transcription factor 29-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.27e-33NAC domain containing protein 47