PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV52969.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 233aa    MW: 27951.8 Da    PI: 9.6206
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV52969.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.52.3e-31231422127
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                  pGfrF+P+d+ l+++yLkk ++ + ++  + i+++++y + P++L  +   ++e+ wyfF++rd+k     r  r+ ++gyWk  g+++++++ ++  
  KZV52969.1  23 RPGFRFEPEDHMLINDYLKKFINFQLTRY-SNIPTINVYMFTPRNLSeAYPCQGEDVWYFFTPRDRK-----RLYRVCANGYWKCYGTKQQIYH-DNVR 114
                 79*********************999888.77**************83444456779********97.....789*99****************.9999 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyr 127
                 +g k++L+fy+g+ p+g++t Wvm+ey 
  KZV52969.1 115 IGYKNSLIFYEGEPPNGRETIWVMKEYI 142
                 ***************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-3819169IPR003441NAC domain
PROSITE profilePS5100538.01522169IPR003441NAC domain
PfamPF023659.6E-1824141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MYPTLQRIAS GPDEGEYTRV HLRPGFRFEP EDHMLINDYL KKFINFQLTR YSNIPTINVY  60
MFTPRNLSEA YPCQGEDVWY FFTPRDRKRL YRVCANGYWK CYGTKQQIYH DNVRIGYKNS  120
LIFYEGEPPN GRETIWVMKE YIADPPSRLR DDETGEIMDD YVLCRIHMRP RCRLPPRNAY  180
KQLLSSFAKL STTGRTYKSA GHKRRKTEQQ RQYNTLAPHS EIKSADFWKL KEW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-281816913165NO APICAL MERISTEM PROTEIN
1ut4_B7e-281816913165NO APICAL MERISTEM PROTEIN
1ut7_A7e-281816913165NO APICAL MERISTEM PROTEIN
1ut7_B7e-281816913165NO APICAL MERISTEM PROTEIN
3swm_A8e-281816916168NAC domain-containing protein 19
3swm_B8e-281816916168NAC domain-containing protein 19
3swm_C8e-281816916168NAC domain-containing protein 19
3swm_D8e-281816916168NAC domain-containing protein 19
3swp_A8e-281816916168NAC domain-containing protein 19
3swp_B8e-281816916168NAC domain-containing protein 19
3swp_C8e-281816916168NAC domain-containing protein 19
3swp_D8e-281816916168NAC domain-containing protein 19
4dul_A7e-281816913165NAC domain-containing protein 19
4dul_B7e-281816913165NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV52969.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7D3R21e-176A0A2Z7D3R2_9LAMI; NAC domain-containing protein 2-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-32NAC domain containing protein 47