PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53182.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TALE
Protein Properties Length: 696aa    MW: 76536.9 Da    PI: 7.4199
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53182.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.3e-095005371954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yps +++  LA+++gL+ +qV++WF N R +
  KZV53182.1 500 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 537
                 664559******************************88 PP
2BELL95.35.4e-313764321672
        BELL  16 leeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    Vd+rY++y+eq+q+v++sF++v+g g+a pYt lA+ka+SrhFrcLkdai+ qi
  KZV53182.1 376 TRHVDRRYNHYCEQMQMVVNSFDMVMGFGAAVPYTCLAQKAMSRHFRCLKDAISAQI 432
                 678****************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.4E-37289430IPR006563POX domain
PfamPF075262.5E-34294429IPR006563POX domain
PROSITE profilePS5007112.568478541IPR001356Homeobox domain
CDDcd000861.83E-12481542No hitNo description
SMARTSM003891.2E-9481545IPR001356Homeobox domain
SuperFamilySSF466892.35E-17482548IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.1E-29484547IPR009057Homeodomain-like
PfamPF059203.5E-18498537IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    Send to blast
MSQDYHQSGI FSFSNGSFER SQQEQLQQIR KDKLRIQGFE PPPPLVAMEE EDSGGVLPVY  60
ESASMLQEMF NFPSGGVGTA TELLQNQISP GYRIPTTISP TGTHESVADW FLHRQGIVGG  120
GGLGDSKSQH HQISSLNADP AAVMQLFLMN PQQQRSPSPS PSQNPLPNSS TLHMLLPNQS  180
SSPSPSNLQA FQTAPGGGFG QFAWIPNRGN ENNPNDQIPG VVEGQGLSLS LSSSLQQFDA  240
AKAEMRMQDE SMMFFGHGGG PTSATYRLKN MVAGGGGQLH FQGINQSHFG AVNILRNSKY  300
SKAAQELLDE FCGVGRSQFK KTNSKQTLVP AVLPVEEVEL QVAEIHHLLQ KISLRYQLLT  360
GLSIRRERSN YCPCLTRHVD RRYNHYCEQM QMVVNSFDMV MGFGAAVPYT CLAQKAMSRH  420
FRCLKDAISA QIKQTCELLG EKDAGTSGIT KGETPRLRVL EQSLRQQRAF HHMGIMEQEA  480
WRPQRGLPER SVNILRAWLF EHFLHPYPSD ADKHLLARQT GLSRNQVSNW FINARVRLWK  540
PMVEEMYQQE SKDEAEESQR DQSSSSSSAA GAHTNNAQTP TPHAASTTPA AAVFTPPPAG  600
KRSEINGTES DPTFMAINRQ CFTESQHMIR ANMFAASNSD AIPLPAMHAS GVAPSRNHAD  660
VESTLRGLGS SAGDVSLTLG LRHAGNLSEK NRFLGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-16487545563Homeobox protein Meis2
3k2a_B2e-16487545563Homeobox protein Meis2
4xrm_A2e-16487545563Homeobox protein Meis2
4xrm_B2e-16487545563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53182.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099269.10.0BEL1-like homeodomain protein 4
TrEMBLA0A2Z7D1280.0A0A2Z7D128_9LAMI; Uncharacterized protein
STRINGVIT_04s0023g01020.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33412139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-118BEL1-like homeodomain 2