PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53619.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 212aa    MW: 23633 Da    PI: 9.0356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53619.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.91.9e-212979256
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+taeeAa a+++a+++++g+
  KZV53619.1 29 RYRGVRQRP-WGKWAAEIRDpF-----KaTRVWLGTFDTAEEAATAYDEAALRFRGN 79
                7********.**********66.....56*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.6E-382992IPR001471AP2/ERF domain
PfamPF008479.2E-152978IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-332987IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-232988IPR016177DNA-binding domain
PROSITE profilePS5103225.1322986IPR001471AP2/ERF domain
CDDcd000181.37E-332988No hitNo description
PRINTSPR003672.3E-123041IPR001471AP2/ERF domain
PRINTSPR003672.3E-125268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MYAYTPTSKY SQLHKADANE SSSRHLSRRY RGVRQRPWGK WAAEIRDPFK ATRVWLGTFD  60
TAEEAATAYD EAALRFRGNK AKLNFPENVS RVIQETPPDQ SSRTTIFGLS GSFDQPIPHS  120
SFSSNSQSSC SAGMIHLDNI HRRQAASDGS CNLLNEWMQH PSGLLVPHFL TRYPNHSMFY  180
PADDPPPQNA EDGRSGGGAE YFSSGTRRSS SG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-233090667ATERF1
3gcc_A1e-233090667ATERF1
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53619.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090449.11e-48ethylene-responsive transcription factor ABR1-like
TrEMBLA0A2Z7D5I01e-157A0A2Z7D5I0_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.12e-26related to AP2 6